Metabolízame

Metabolic pathway

Calvin-Benson cycle

Fixes three molecules of carbon dioxide and turns them into one three-carbon sugar, spending the ATP and NADPH from the light reactions. Most of the cycle is not about fixing carbon, but about rebuilding the molecule that captures it.

In
3 Carbon dioxide + 9 ATP + 6 NADPH + 6 Proton + 5 Water
Out
Glyceraldehyde 3-phosphate + 9 ADP + 6 NADP+ + 8 Inorganic phosphate
Location
Chloroplast stroma

Fun facts

  • RuBisCOIt is the most abundant protein in the biosphere, and also one of the slowest: it fixes only a few molecules per second. Plants make up for it by making huge amounts of it.

Reactions

#EnzymeΔG°′
1×3RuBisCOEC 4.1.1.39 · irreversibleRibulose 1,5-bisphosphate + Carbon dioxide + Water → 2 3-Phosphoglycerate—
2×6Phosphoglycerate kinaseEC 2.7.2.33-Phosphoglycerate + ATP ⇌ 1,3-Bisphosphoglycerate + ADP—
3×6Glyceraldehyde-3-phosphate dehydrogenase (NADP+)EC 1.2.1.131,3-Bisphosphoglycerate + NADPH + Proton ⇌ Glyceraldehyde 3-phosphate + NADP+ + Inorganic phosphate—
4×2Triose phosphate isomeraseEC 5.3.1.1Glyceraldehyde 3-phosphate ⇌ Dihydroxyacetone phosphate—
5AldolaseEC 4.1.2.13Dihydroxyacetone phosphate + Glyceraldehyde 3-phosphate ⇌ Fructose 1,6-bisphosphate—
6Fructose-1,6-bisphosphataseEC 3.1.3.11 · irreversibleFructose 1,6-bisphosphate + Water → Fructose 6-phosphate + Inorganic phosphate—
7TransketolaseEC 2.2.1.1Fructose 6-phosphate + Glyceraldehyde 3-phosphate ⇌ Erythrose 4-phosphate + Xylulose 5-phosphate—
8AldolaseEC 4.1.2.13Erythrose 4-phosphate + Dihydroxyacetone phosphate ⇌ Sedoheptulose 1,7-bisphosphate—
9Sedoheptulose-1,7-bisphosphataseEC 3.1.3.37 · irreversibleSedoheptulose 1,7-bisphosphate + Water → Sedoheptulose 7-phosphate + Inorganic phosphate—
10TransketolaseEC 2.2.1.1Sedoheptulose 7-phosphate + Glyceraldehyde 3-phosphate ⇌ Ribose 5-phosphate + Xylulose 5-phosphate—
11Ribose-5-phosphate isomeraseEC 5.3.1.6Ribose 5-phosphate ⇌ Ribulose 5-phosphate—
12×2Ribulose-5-phosphate 3-epimeraseEC 5.1.3.1Xylulose 5-phosphate ⇌ Ribulose 5-phosphate—
13×3PhosphoribulokinaseEC 2.7.1.19 · irreversibleRibulose 5-phosphate + ATP → Ribulose 1,5-bisphosphate + ADP—

0 of 13 reactions with a documented ΔG.

Map of Calvin-Benson cycle: 13 reactions drawn as arrows between their metabolites, with what goes in and out at each step.Calvin-Benson cycleChloroplast stroma · 13 reactions · 2 in a red ring, regulatedRegulation point of the pathwayRegulation point of the pathwayCO₂ + H₂OATPADPNADPH + H⁺NADP+ + PiH₂OPiXu5PXu5PH₂OPiXu5PXu5PXu5PATPADPRibulose 1,5-bisphosphate3-Phosphoglycerate1,3-BisphosphoglycerateGlyceraldehyde 3-phosphateDihydroxyacetone phosphateFructose 1,6-bisphosphateFructose 6-phosphateErythrose 4-phosphateSedoheptulose 1,7-bisphosphateSedoheptulose 7-phosphateRibose 5-phosphateRibulose 5-phosphate

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What to download
Format

The data sheet includes the map. The logo goes at the bottom.

Sources

  • Nelson, D. L. & Cox, M. M. (2021). Lehninger. Principios de bioquímica, 8.ª ed., ch. 20
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